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| Position | Top player | Team ranking | Top prospect | Organizational ranking | Overall ranking |
|---|---|---|---|---|---|
| Catchers | Manuel Aleman | 12th | Jesus Cervantes | 28th | 25th |
| First Basemen | David Simpson | 7th | Josh Radzik | 17th | 6th |
| Second Basemen | Jim Richards | 5th | Nick Suydam | 16th | 6th |
| Third Basemen | Eric Pajak | 1st | Ken Mynard | 15th | 1st |
| Shortstops | Humberto Rodriguez | 26th | Jonathan Satterlee | 25th | 29th |
| Left Fielders | Willem Acret | 17th | Alberto Paredes | Tied for 16th | 15th |
| Center Fielders | Cody O'Grady | 3rd | Tyrese Walker | 13th | 2nd |
| Right Fielders | Mike Clingerman | 2nd | Josh Gooch | 16th | 2nd |
| Starting Pitchers | Chad Morrisette | 7th | Alex Castaneda | 29th | 24th |
| Relievers | Mark Sonnier | 5th | Marco Castanon | 7th | 3rd |
| Closers | Brian Granados | 17th | Nick Hirsch | 23rd | 17th |
