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| Position | Top player | Team ranking | Top prospect | Organizational ranking | Overall ranking |
|---|---|---|---|---|---|
| Catchers | Juan Lavastida | 19th | Josh Tornblom | Tied for 18th | 14th |
| First Basemen | Paul Wellman | 2nd | Ryan Dybing | 14th | 2nd |
| Second Basemen | Jeremy Marant | 14th | Tied for 29th | 30th | |
| Third Basemen | Joe Friedrichs | 10th | Jeff Bultman | 14th | 4th |
| Shortstops | Matt Martin | 14th | Marquis Ross | 1st | 9th |
| Left Fielders | Mario Mozzafiato | 4th | Jared York | 26th | 22nd |
| Center Fielders | Tyler Proctor | 10th | Greg Summitt | Tied for 14th | 8th |
| Right Fielders | Josh O'Brien | Tied for 6th | Jeremy Michalek | Tied for 16th | Tied for 5th |
| Starting Pitchers | Casey Quinn | 25th | Angel Guevara | 20th | 22nd |
| Relievers | Izzy Gonzales | 5th | Jason Archie | 7th | 2nd |
| Closers | Cesar de Leon | 13th | Roy Brown | 3rd | 9th |
