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| Position | Top player | Team ranking | Top prospect | Organizational ranking | Overall ranking |
|---|---|---|---|---|---|
| Catchers | Steve Brohard | 15th | Chad Parga | 18th | 13th |
| First Basemen | Matt Ferris | 3rd | John Stout | 24th | 4th |
| Second Basemen | Israel Galvan | 21st | Luke Cappelluti | Tied for 24th | 20th |
| Third Basemen | Scott Sneed | 17th | Dave Tennant | 14th | 16th |
| Shortstops | Eric Petry | 19th | 30th | 30th | |
| Left Fielders | Colin Woodson | 10th | Chad Sample | Tied for 16th | 11th |
| Center Fielders | Chris Grover | 19th | Juan Maes | 9th | 13th |
| Right Fielders | John Bragg | 18th | Jason Sisk | 24th | 27th |
| Starting Pitchers | Juan Murillo | 2nd | Jim Johnson | 28th | 13th |
| Relievers | Jose Munoz | 21st | Steve Gibbons | 27th | 25th |
| Closers | Jonathan Jackson | 9th | Cameron Lopez | Tied for 25th | 12th |
